graphlets

a python library for cheminformatics and machine learning

MiNAA aligns a pair of networks based their topologies and biologies.

[WWW'25] Official implementation of "Beyond Neighbors: Distance-Generalized Graphlets for Enhanced Graph Characterization"

Counts exact frequencies of typed graphlets up to size 5 in heterogeneous networks, enabling semantically rich structural analysis of complex graphs.

GRAph ALigner: Algorithm to align two networks or graphs. This implementation is specific for program dependency graph to detect code similarity.

MATLAB scripts and functions for Microbial Network Analysis (MNA)

Orbit counting algorithm: for counting graphlet degree vector(automorphism orbits) of 4/5 node graphlets in the host graph.

Clustering of Twitter Networks with Orbital Signature Embeddings

EpiGraph is a Fiji plugin that combines computational geometry and graph theory to measure the degree of arrangement in any computational or natural tessellation.

An Atomic Graphlet—Graph Logical Inference Database Engine Prototype