Issues

• v2: Combining experiment and condition tables

  PEtab-dev/PEtab#657 · Filter by author elbert5770 opened on Jan 1, 2026
  1

• Poisson and negative binomial distributions for parameter priors and noise models

  v2
  PEtab-dev/PEtab#653 · Filter by author dweindl opened on Nov 12, 2025
  3

  

• v2: Add how-tos

  documentation
  PEtab-dev/PEtab#637 · Filter by author dweindl opened on Jul 9, 2025
  1

• v2: add clarification sentence about simulation start time and end times

  PEtab-dev/PEtab#626 · Filter by author matthiaskoenig opened on May 7, 2025 · PEtab 2.0.0
  4

• Interaction of parameter bounds and parameter priors

  questionv1
  PEtab-dev/PEtab#591 · Filter by author dweindl opened on Dec 11, 2024

• Allow species in yValues of the visualization table

  specification changevisualization
  PEtab-dev/PEtab#569 · Filter by author paulflang opened on Oct 20, 2023
  2

• PEtab extension for NLME

  extension
  PEtab-dev/PEtab#566 · Filter by author paulflang opened on Aug 2, 2023
  20

• Clarification of condition table what happens if NaN is provided as a value

  v1
  PEtab-dev/PEtab#542 · Filter by author matthiaskoenig opened on May 16, 2022

• Clarification for condition table what happens if a parameter ID is provided as value

  v1
  PEtab-dev/PEtab#541 · Filter by author matthiaskoenig opened on May 12, 2022
  1

• Condition table not specified for parameters governed by rate rules

  v1
  PEtab-dev/PEtab#539 · Filter by author matthiaskoenig opened on Mar 30, 2022
  3

• Specification for formula format

  specification changev1
  PEtab-dev/PEtab#522 · Filter by author dilpath opened on Apr 12, 2021
  1

• Clarify reinitialization for parameters in the condition table

  v1
  PEtab-dev/PEtab#513 · Filter by author dweindl opened on Mar 2, 2021
  7

• Visualization: add option to scale data

  questionspecification changevisualization
  PEtab-dev/PEtab#501 · Filter by author dweindl opened on Jan 21, 2021

• Specifying units

  enhancementquestionspecification change
  PEtab-dev/PEtab#500 · Filter by author dweindl opened on Jan 20, 2021
  1

• Visualization specification: Is tsv the right choice?

  questionspecification changevisualization
  PEtab-dev/PEtab#499 · Filter by author dweindl opened on Jan 18, 2021
  2

• Visualization: allow grouping plots?

  questionspecification changevisualization
  PEtab-dev/PEtab#498 · Filter by author dweindl opened on Jan 18, 2021

• Extension to correlated observables

  enhancementspecification change
  PEtab-dev/PEtab#495 · Filter by author FFroehlich opened on Jan 8, 2021

• Add support for non-SBML models

  enhancementspecification change
  PEtab-dev/PEtab#436 · Filter by author dweindl opened on May 10, 2020 · PEtab 2.0.0
  6

• Add support for ordinal / qualitative data

  specification change
  PEtab-dev/PEtab#425 · Filter by author LeonardSchmiester opened on Apr 2, 2020

• uniform vs. logUniform prior

  enhancementquestionv1
  PEtab-dev/PEtab#402 · Filter by author JanHasenauer opened on Mar 22, 2020 · PEtab 2.0.0
  30

  

• allow formulation of additional constraints

  specification change
  PEtab-dev/PEtab#375 · Filter by author LarsFroehling opened on Mar 10, 2020
  9

• Can condition tables refer to parameters introduced in {observable,noise}Formula?

  questionspecification changev1
  PEtab-dev/PEtab#362 · Filter by author dweindl opened on Mar 2, 2020 · PEtab 2.0.0
  2