Issues

• Strengthen validation and measurement

  ELIFE-ASU/parallelassemblycpp#138 · Filter by author LouieSlocombe opened on Sep 28, 2026

• Seed string search with a Re-Pair construction

  ELIFE-ASU/parallelassemblycpp#137 · Filter by author LouieSlocombe opened on Sep 28, 2026

• Add a bond-type-aware bound.

  ELIFE-ASU/parallelassemblycpp#136 · Filter by author LouieSlocombe opened on Sep 28, 2026

• Parallelize independent calculations for batch throughput

  ELIFE-ASU/parallelassemblycpp#127 · Filter by author LouieSlocombe opened on Sep 25, 2026

• Tune MPI refill granularity at larger rank counts

  ELIFE-ASU/parallelassemblycpp#126 · Filter by author LouieSlocombe opened on Sep 25, 2026

• Improve automatic worker selection

  ELIFE-ASU/parallelassemblycpp#124 · Filter by author LouieSlocombe opened on Sep 25, 2026

• Optimize preparation for small and setup-heavy inputs

  ELIFE-ASU/parallelassemblycpp#123 · Filter by author LouieSlocombe opened on Sep 25, 2026

• Reduce shared transposition-table traffic

  ELIFE-ASU/parallelassemblycpp#122 · Filter by author LouieSlocombe opened on Sep 25, 2026

• Add alternative valid pathways

  ELIFE-ASU/parallelassemblycpp#99 · Filter by author LouieSlocombe opened on Sep 11, 2026
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